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Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.

Fernando Uriel Rojas-RojasDavid Sánchez-LópezErika Yanet Tapia-GarcíaIvan Arroyo-HerreraMaskit MaymonEthan HummMarcel HuntemannAlicia ClumManoj PillayKrishnaveni PalaniappanNeha VargheseNatalia MikhailovaDimitrios StamatisT B K ReddyNatalia IvanovaNikos KyrpidesTanja WoykeNicole ShapiroAnn M HirschJ Antonio IbarraPaulina Estrada-de Los Santos
Published in: Current microbiology (2019)
Burkholderia cenocepacia TAtl-371 was isolated from the rhizosphere of a tomato plant growing in Atlatlahucan, Morelos, Mexico. This strain exhibited a broad antimicrobial spectrum against bacteria, yeast, and fungi. Here, we report and describe the improved, high-quality permanent draft genome of B. cenocepacia TAtl-371, which was sequenced using a combination of PacBio RS and PacBio RS II sequencing methods. The 7,496,106 bp genome of the TAtl-371 strain is arranged in three scaffolds, contains 6722 protein-coding genes, and 99 RNA only-encoding genes. Genome analysis revealed genes related to biosynthesis of antimicrobials such as non-ribosomal peptides, siderophores, chitinases, and bacteriocins. Moreover, analysis of bacterial growth on different carbon and nitrogen sources shows that the strain retains its antimicrobial ability.
Keyphrases
  • genome wide
  • dna methylation
  • staphylococcus aureus
  • drinking water
  • genome wide identification
  • single cell
  • cell wall
  • amino acid
  • gene expression
  • protein protein
  • small molecule
  • tissue engineering