BioCoder: a benchmark for bioinformatics code generation with large language models.

Xiangru TangBill QianRick GaoJiakang ChenXinyun ChenMark B Gerstein

Published in: Bioinformatics (Oxford, England) (2024)

All datasets, benchmark, Docker images, and scripts required for testing are available at: https://github.com/gersteinlab/biocoder and https://biocoder-benchmark.github.io/.

Keyphrases

deep learning
autism spectrum disorder
convolutional neural network
optical coherence tomography
rna seq