Shedding light on ultrafast ring-twisting pathways of halogenated GFP chromophores from the excited to ground state.
Sean A BoulangerCheng ChenLongteng TangLiangdong ZhuNadezhda S BaleevaIvan N MyasnyankoMikhail S BaranovChong FangPublished in: Physical chemistry chemical physics : PCCP (2021)
Since green fluorescent protein (GFP) has revolutionized molecular and cellular biology for about three decades, there has been a keen interest in understanding, designing, and controlling the fluorescence properties of GFP chromophore (i.e., HBDI) derivatives from the protein matrix to solution. Amongst these cross-disciplinary efforts, the elucidation of excited-state dynamics of HBDI derivatives holds the key to correlating the light-induced processes and fluorescence quantum yield (FQY). Herein, we implement steady-state electronic spectroscopy, femtosecond transient absorption (fs-TA), femtosecond stimulated Raman spectroscopy (FSRS), and quantum calculations to study a series of mono- and dihalogenated HBDI derivatives (X = F, Cl, Br, 2F, 2Cl, and 2Br) in basic aqueous solution, gaining new insights into the photophysical reaction coordinates. In the excited state, the halogenated "floppy" chromophores exhibit an anti-heavy atom effect, reflected by strong correlations between FQY vs. Franck-Condon energy (EFC) or Stokes shift, and knrvs. EFC, as well as a swift bifurcation into the I-ring (major) and P-ring (minor) twisting motions. In the ground state, both ring-twisting motions become more susceptible to sterics and exhibit spectral signatures from the halogen-dependent hot ground-state absorption band decay in TA data. We envision this type of systematic analysis of the halogenated HBDI derivatives to provide guiding principles for the site-specific modification of GFP chromophores, and expand design space for brighter and potentially photoswitchable organic chemical probes in aqueous solution with discernible spectral signatures throughout the photocycle.
Keyphrases
- aqueous solution
- energy transfer
- single molecule
- molecular dynamics
- raman spectroscopy
- optical coherence tomography
- structure activity relationship
- living cells
- quantum dots
- protein protein
- small molecule
- genome wide
- high resolution
- electron transfer
- density functional theory
- fluorescent probe
- magnetic resonance imaging
- binding protein
- amino acid
- mass spectrometry
- molecular dynamics simulations
- photodynamic therapy
- computed tomography
- fluorescence imaging
- magnetic resonance
- nucleic acid
- solid state
- endovascular treatment
- deep learning