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Real-time intelligent classification of COVID-19 and thrombosis via massive image-based analysis of platelet aggregates.

Chenqi ZhangMaik HerbigYuqi ZhouMasako NishikawaMohammad Shifat-E-RabbiHiroshi KannoRuoxi YangYuma IbayashiTing-Hui XiaoGustavo K RohdeMasataka SatoSatoshi KoderaMasao DaimonYutaka YatomiKeisuke Goda
Published in: Cytometry. Part A : the journal of the International Society for Analytical Cytology (2023)
Microvascular thrombosis is a typical symptom of COVID-19 and shows similarities to thrombosis. Using a microfluidic imaging flow cytometer, we measured the blood of 181 COVID-19 samples and 101 non-COVID-19 thrombosis samples, resulting in a total of 6.3 million bright-field images. We trained a convolutional neural network to distinguish single platelets, platelet aggregates, and white blood cells and performed classical image analysis for each subpopulation individually. Based on derived single-cell features for each population, we trained machine learning models for classification between COVID-19 and non-COVID-19 thrombosis, resulting in a patient testing accuracy of 75%. This result indicates that platelet formation differs between COVID-19 and non-COVID-19 thrombosis. All analysis steps were optimized for efficiency and implemented in an easy-to-use plugin for the image viewer napari, allowing the entire analysis to be performed within seconds on mid-range computers, which could be used for real-time diagnosis.
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