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Deep learning for cancer type classification and driver gene identification.

Zexian ZengChengsheng MaoAndy VoXiaoyu LiJanna Ore NugentSeema A KhanSusan E ClareYuan Luo
Published in: BMC bioinformatics (2021)
Our results support DeepCues as a novel method to improve the representational resolution of DNA sequencings and its power in deriving features from raw sequences for cancer type prediction, as well as discovering new cancer relevant genes.
Keyphrases
  • papillary thyroid
  • deep learning
  • squamous cell
  • machine learning
  • genome wide
  • gene expression
  • artificial intelligence
  • childhood cancer
  • squamous cell carcinoma
  • copy number
  • young adults
  • convolutional neural network