Characterization of the first complete chloroplast genome of Amaranthus hybridus (Caryophyllales: Amaranthaceae) with phylogenetic implications.

Xue BaiXueling YeYiming LuoChangying Liu Qi Wu

Published in: Mitochondrial DNA. Part B, Resources (2021)

In the present study, the complete chloroplast genome of Amaranthus hybridus was sequenced and assembled. The complete chloroplast genome of Amaranthus hybridus is 150,709 in size, with the GC content of 36.56%. The chloroplast genome of Amaranthus hybridus contained 86 protein-coding genes (PCGs), eight ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. Phylogenetic analysis based on combined chloroplast gene dataset indicated that the Amaranthus hybridus exhibited a close relationship with A. hypochondriacus and A. caudatus.

Keyphrases

genome wide
arabidopsis thaliana
dna methylation
genome wide identification
copy number
bioinformatics analysis
genome wide analysis
gene expression
nucleic acid
binding protein