Modes of Micromolar Host-Guest Binding of β-Cyclodextrin Complexes Revealed by NMR Spectroscopy in Salt Water.
Josef TomečekAndrea ČablováAneta HromádkováJan NovotnýRadek MarekIvo DurníkPetr KulhánekZdeňka PruckováMichal RouchalLenka DastychováRobert VíchaPublished in: The Journal of organic chemistry (2021)
Multitopic supramolecular guests with finely tuned affinities toward widely explored cucurbit[n]urils (CBs) and cyclodextrins (CDs) have been recently designed and tested as functional components of advanced supramolecular systems. We employed various spacers between the adamantane cage and a cationic moiety as a tool for tuning the binding strength toward CB7 to prepare a set of model guests with KCB7 and Kβ-CD values of (0.6-5.0) × 1010 M-1 and (0.6-2.6) × 106 M-1, respectively. These accessible adamantylphenyl-based binding motifs open a way toward supramolecular components with an outstanding affinity toward β-cyclodextrin. 1H NMR experiments performed in 30% CaCl2/D2O at 273 K along with molecular dynamics simulations allowed us to identify two arrangements of the guest@β-CD complexes. The approach, joining experimental and theoretical methods, provided a better understanding of the structure of cyclodextrin complexes and related molecular recognition, which is highly important for the rational design of drug delivery systems, molecular sensors and switches.
Keyphrases
- molecular dynamics simulations
- capillary electrophoresis
- water soluble
- ionic liquid
- dna binding
- mass spectrometry
- energy transfer
- magnetic resonance
- binding protein
- minimally invasive
- quantum dots
- molecular docking
- high resolution
- single molecule
- dna repair
- oxidative stress
- dna damage
- solid state
- transcription factor
- drug induced