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The complete mitochondrial genome sequence of Pachycephus smyrnensis Stein, 1876 (Hymenoptera: Cephidae) with phylogenetic analysis.

Mengmeng LiuMin XuZejian LiMahir BudakMeicai WeiLin Liu
Published in: Mitochondrial DNA. Part B, Resources (2023)
The complete mitochondrial genome of Pachycephus smyrnensis Stein, 1876 collected from Sivas, Turkey, is described. The circled genome is 20,393 bp in length and contains a typical set of 37 genes. The missing control regions, trnQ and trnI in previously reported P. smyrnensis (KX907846) were obtained in this precise assembly based on a considerable amount of raw data. A denser sampled phylogenetic analysis shows that the two P. smyrnensis constitute a branch sister to P. cruentatus (Eversmann, 1847). Pachycephus is a sister group of Phylloecus within Hartigiinae and remote from Characopygus , a genus within Cephinae. The monophyly of Pachycephini has been rejected.
Keyphrases
  • genome wide
  • oxidative stress
  • dna methylation
  • big data
  • transcription factor
  • data analysis
  • genome wide identification
  • bioinformatics analysis