Dysregulation in Multiple Transcriptomic Endometrial Pathways Is Associated with Recurrent Implantation Failure and Recurrent Early Pregnancy Loss.
Norhayati Liaqat Ali KhanTamer NafeeTingting ShaoAmber Rose HartSarah ElliottBolarinde OlaPaul Roy HeathAlireza FazeliPublished in: International journal of molecular sciences (2022)
Overlapping disease aetiologies associated with multiple altered biological processes have been identified that change the endometrial function leading to recurrent implantation failure (RIF) and recurrent early pregnancy loss (REPL). We aimed to provide a detailed insight into the nature of the biological malfunction and related pathways of differentially expressed genes in RIF and REPL. Endometrial biopsies were obtained from 9 women experiencing RIF, REPL and control groups. Affymetrix microarray analysis was performed to measure the gene expression level of the endometrial biopsies. Unsupervised clustering of endometrial samples shows scattered distribution of gene expression between the RIF, REPL and control groups. 2556 and 1174 genes ( p value < 0.05, Fold change > 1.2) were significantly altered in the endometria of RIF and REPL patients' group, respectively compared to the control group. Downregulation in Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of the differentially expressed genes (DEGs) in RIF and REPL including ribosome and oxidative phosphorylation pathways. Gene Ontology (GO) analysis revealed ribosomes and mitochondria inner membrane as the most significantly downregulated cellular component (CC) affected in RIF and REPL. Determination of the dysregulated genes and related biological pathways in RIF and REPL will be key in understanding their molecular pathology and of major importance in addressing diagnosis, prognosis, and treatment issues.
Keyphrases
- pulmonary tuberculosis
- gene expression
- genome wide
- genome wide identification
- mycobacterium tuberculosis
- bioinformatics analysis
- dna methylation
- endometrial cancer
- end stage renal disease
- single cell
- genome wide analysis
- ejection fraction
- newly diagnosed
- rna seq
- chronic kidney disease
- copy number
- type diabetes
- transcription factor
- cell death
- cell proliferation
- polycystic ovary syndrome
- metabolic syndrome
- signaling pathway
- peritoneal dialysis
- insulin resistance
- single molecule
- solid phase extraction
- breast cancer risk