Shaping centromeres to resist mitotic spindle forces.
Josh LawrimoreKerry S BloomPublished in: Journal of cell science (2022)
The centromere serves as the binding site for the kinetochore and is essential for the faithful segregation of chromosomes throughout cell division. The point centromere in yeast is encoded by a ∼115 bp specific DNA sequence, whereas regional centromeres range from 6-10 kbp in fission yeast to 5-10 Mbp in humans. Understanding the physical structure of centromere chromatin (pericentromere in yeast), defined as the chromatin between sister kinetochores, will provide fundamental insights into how centromere DNA is woven into a stiff spring that is able to resist microtubule pulling forces during mitosis. One hallmark of the pericentromere is the enrichment of the structural maintenance of chromosome (SMC) proteins cohesin and condensin. Based on studies from population approaches (ChIP-seq and Hi-C) and experimentally obtained images of fluorescent probes of pericentromeric structure, as well as quantitative comparisons between simulations and experimental results, we suggest a mechanism for building tension between sister kinetochores. We propose that the centromere is a chromatin bottlebrush that is organized by the loop-extruding proteins condensin and cohesin. The bottlebrush arrangement provides a biophysical means to transform pericentromeric chromatin into a spring due to the steric repulsion between radial loops. We argue that the bottlebrush is an organizing principle for chromosome organization that has emerged from multiple approaches in the field.
Keyphrases
- genome wide
- transcription factor
- dna damage
- gene expression
- single molecule
- saccharomyces cerevisiae
- circulating tumor
- copy number
- single cell
- cell free
- living cells
- dna methylation
- physical activity
- nucleic acid
- mental health
- small molecule
- circulating tumor cells
- high throughput
- rna seq
- convolutional neural network
- optical coherence tomography
- cell therapy
- machine learning
- stem cells
- high resolution
- cell cycle
- case control
- photodynamic therapy
- monte carlo