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Viridibacillus soli sp. nov., isolated from forest soil in Ailaoshan National Nature Reserve.

Yan XuJiang-Yuan ZhaoYu GengHui-Ren YuanLe-Le LiMeng-Liang WenMing-Gang LiShu-Kun Tang
Published in: Archives of microbiology (2021)
A Gram stain-positive, rod-shaped, and subterminal endospore-forming bacterium, designated strain YIM B01967 T , was isolated from a forest soil sample collected in Ailaoshan National Nature Reserve, Yuxi City, Xinpin county, Yunnan province, China. Strain YIM B01967 T showed the highest 16S rRNA gene sequence similarity with Viridibacillus arvi (99.1%) and Viridibacillus arenosi (98.9%). Based on the phylogenetic and 16S rRNA gene sequence results, strain YIM B01967 T was affiliated to the genus Viridibacillus. The growth of YIM B01967 T was observed at 15-35 °C (optimum, 28 °C), pH 7.0-9.0 (optimum, pH 7.5) and in the presence of 0-2% (w/v) NaCl (optimum in 2% NaCl). The cell wall sugars include ribose, glucose, arabinose, galactose, and mannose. The quinone system consisted of the major compound MK-8 and moderate amounts of MK-7. The major fatty acids (> 10%) included iso-C 15:0 , anteiso-C 15:0 , C 16:1 ω10c. The major polar lipids profile included DPG, PME. The cell wall peptidoglycan was most likely of the type A4α with an L-Lys-D-Asp interpeptide bridge. The genomic DNA G + C content of strain YIM B01967 T was 36.3 mol%. The ANI and digital DNA-DNA hybridization (dDDH) values between strain YIM B01967 T and Viridibacillus arvi DSM 16317  T , Viridibacillus arenosi DSM 16319  T were 61.0% and 32.1%, 60.0% and 33.1% based on the draft genome sequence. The results support the conclusion that strain YIM B01967 T represents a novel species of the genus Viridibacillus, for which the name Viridibacillus soli sp. nov., is proposed. The type strain is YIM B01967 T (= KCTC 43249  T  = CGMCC 1.18436  T ).
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