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Mapping the Binding Sites of UDP and Prostaglandin E2 Glyceryl Ester in the Nucleotide Receptor P2Y 6 .

Anne ZimmermannOanh VuAntje BrüserGregory SliwoskiLawrence J MarnettJens MeilerTorsten Schöneberg
Published in: ChemMedChem (2022)
Cyclooxygenase-2 catalyzes the biosynthesis of prostaglandins from arachidonic acid and the biosynthesis of prostaglandin glycerol esters (PG-Gs) from 2-arachidonoylglycerol. PG-Gs are mediators of several biological actions such as macrophage activation, hyperalgesia, synaptic plasticity, and intraocular pressure. Recently, the human UDP receptor P2Y 6 was identified as a target for the prostaglandin E2 glycerol ester (PGE 2 -G). Here, we show that UDP and PGE 2 -G are evolutionary conserved endogenous agonists at vertebrate P2Y 6 orthologs. Using sequence comparison of P2Y 6 orthologs, homology modeling, and ligand docking studies, we proposed several receptor positions participating in agonist binding. Site-directed mutagenesis and functional analysis of these P2Y 6 mutants revealed that both UDP and PGE 2 -G share in parts one ligand-binding site. Thus, the convergent signaling of these two chemically very different agonists has already been manifested in the evolutionary design of the ligand-binding pocket.
Keyphrases
  • endothelial cells
  • genome wide
  • adipose tissue
  • high resolution
  • single cell
  • molecular dynamics simulations
  • binding protein
  • nitric oxide
  • spinal cord
  • dna methylation
  • neuropathic pain
  • mass spectrometry
  • high density