Bioframe: operations on genomic intervals in Pandas dataframes.

null nullNezar AbdennurGeoffrey FudenbergIlya M FlyamerAleksandra A GalitsynaAnton GoloborodkoMaxim ImakaevSergey Venev

Published in: Bioinformatics (Oxford, England) (2024)

Bioframe is open-source under MIT license, cross-platform, and can be installed from the Python Package Index. The source code is maintained by Open2C on GitHub at https://github.com/open2c/bioframe.

Keyphrases

minimally invasive
high throughput
copy number
gene expression
dna methylation