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Whole genome sequencing in a Knobloch syndrome family confirms the molecular diagnosis.

Chetan Khantibai PatelSuzanne BroadgateAhmed ShalabyJing YuAndrea H NemethSusan M DownesStephanie Halford
Published in: Ophthalmic genetics (2021)
To date, all confirmed genetic diagnoses of Knobloch syndrome are attributable to variants in COL18A1. The family described here has a heterozygous novel loss of function variant. Detailed analysis of WGS data combined with family segregation studies concluded that although Asp1672Asn has a high population frequency, it is the most likely second pathogenic variant in our family. This supports the hypothesis that this is a hypomorphic allele, which, in combination with a loss of function pathogenic variant, leads to Knobloch syndrome.To our knowledge, this is the first time that WGS has been used to confirm a molecular diagnosis of Knobloch syndrome in this way and has provided further insight into the molecular mechanisms in this rare disorder.
Keyphrases
  • case report
  • healthcare
  • copy number
  • gene expression
  • genome wide
  • machine learning
  • single molecule
  • electronic health record