Detecting rare diseases in electronic health records using machine learning and knowledge engineering: Case study of acute hepatic porphyria.
Aaron M CohenSteven ChamberlinThomas DelougheryMichelle NguyenSteven BedrickStephen MeningerJohn J KoJigar J AminAlex J WeiWilliam HershPublished in: PloS one (2020)
The application of machine learning and knowledge engineering to EHR data may facilitate the diagnosis of rare diseases such as AHP. Further work will recommend clinical investigation to identified patients' clinicians, evaluate more patients, assess additional feature selection and machine learning algorithms, and apply this methodology to other rare diseases. This work provides strong evidence that population-level informatics can be applied to rare diseases, greatly improving our ability to identify undiagnosed patients, and in the future improve the care of these patients and our ability study these diseases. The next step is to learn how best to apply these EHR-based machine learning approaches to benefit individual patients with a clinical study that provides diagnostic testing and clinical follow up for those identified as possibly having undiagnosed AHP.
Keyphrases
- machine learning
- end stage renal disease
- electronic health record
- ejection fraction
- chronic kidney disease
- healthcare
- newly diagnosed
- peritoneal dialysis
- prognostic factors
- big data
- clinical trial
- palliative care
- deep learning
- hepatitis b virus
- liver failure
- extracorporeal membrane oxygenation
- acute respiratory distress syndrome
- drug induced
- mechanical ventilation