Evaluation of the Polygenic Risk Score for Alzheimer's Disease in Russian Patients with Dementia Using a Low-Density Hydrogel Oligonucleotide Microarray.
Anna Yuryevna IkonnikovaAnna MorozovaOlga AntonovaAlexandra OchnevaElena FedoseevaOlga V AbramovaMarina EmelyanovaMarina FilippovaIrina MorozovaYana A ZorkinaTimur S SyunyakovAlisa AndryushchenkoDenis S AndreyukGeorgiy P KostyukDmitriy A GryadunovPublished in: International journal of molecular sciences (2023)
The polygenic risk score (PRS), together with the ɛ4 allele of the APOE gene ( APOE-ɛ4 ), has shown high potential for Alzheimer's disease (AD) risk prediction. The aim of this study was to validate the model of polygenic risk in Russian patients with dementia. A microarray-based assay was developed to identify 21 markers of polygenic risk and ɛ alleles of the APOE gene. This case-control study included 348 dementia patients and 519 cognitively normal volunteers. Cerebrospinal fluid (CSF) amyloid-β (Aβ) and tau protein levels were assessed in 57 dementia patients. PRS and APOE-ɛ4 were significant genetic risk factors for dementia. Adjusted for APOE-ɛ4 , individuals with PRS corresponding to the fourth quartile had an increased risk of dementia compared to the first quartile (OR 1.85; p -value 0.002). The area under the curve (AUC) was 0.559 for the PRS model only, and the inclusion of APOE-ɛ4 improved the AUC to 0.604. PRS was positively correlated with tTau and pTau181 and inversely correlated with Aβ42/Aβ40 ratio. Carriers of APOE-ɛ4 had higher levels of tTau and pTau181 and lower levels of Aβ42 and Aβ42/Aβ40. The developed assay can be part of a strategy for assessing individuals for AD risk, with the purpose of assisting primary preventive interventions.
Keyphrases
- cognitive decline
- mild cognitive impairment
- end stage renal disease
- high fat diet
- cognitive impairment
- cerebrospinal fluid
- newly diagnosed
- chronic kidney disease
- ejection fraction
- genome wide
- peritoneal dialysis
- gene expression
- high throughput
- copy number
- physical activity
- insulin resistance
- metabolic syndrome
- drug delivery
- protein protein
- climate change
- amino acid