HGTphyloDetect: facilitating the identification and phylogenetic analysis of horizontal gene transfer.

Le YuanHongzhong LuFeiran LiJens NielsenEduard Johannes Kerkhoven

Published in: Briefings in bioinformatics (2023)

The HGTphyloDetect computational toolbox is designed for ease of use and can accurately find HGT events with a very low false discovery rate in a high-throughput manner. The HGTphyloDetect toolbox and its related user tutorial are freely available at https://github.com/SysBioChalmers/HGTphyloDetect.

Keyphrases

high throughput
single cell
copy number
genome wide
small molecule
genome wide identification
gene expression
dna methylation
genetic diversity