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Harnessing a paper-folding mechanism for reconfigurable DNA origami.

Myoungseok KimChanseok LeeKyounghwa JeonJae Young LeeYoung-Joo KimJae Gyung LeeHyunsu KimMaenghyo ChoDo-Nyun Kim
Published in: Nature (2023)
The paper-folding mechanism has been widely adopted in building of reconfigurable macroscale systems because of its unique capabilities and advantages in programming variable shapes and stiffness into a structure 1-5 . However, it has barely been exploited in the construction of molecular-level systems owing to the lack of a suitable design principle, even though various dynamic structures based on DNA self-assembly 6-9 have been developed 10-23 . Here we propose a method to harness the paper-folding mechanism to create reconfigurable DNA origami structures. The main idea is to build a reference, planar wireframe structure 24 whose edges follow a crease pattern in paper folding so that it can be folded into various target shapes. We realized several paper-like folding and unfolding patterns using DNA strand displacement 25 with high yield. Orthogonal folding, repeatable folding and unfolding, folding-based microRNA detection and fluorescence signal control were demonstrated. Stimuli-responsive folding and unfolding triggered by pH or light-source change were also possible. Moreover, by employing hierarchical assembly 26 we could expand the design space and complexity of the paper-folding mechanism in a highly programmable manner. Because of its high programmability and scalability, we expect that the proposed paper-folding-based reconfiguration method will advance the development of complex molecular systems.
Keyphrases
  • single molecule
  • molecular dynamics simulations
  • machine learning
  • mass spectrometry
  • cancer therapy