Complete genome sequence of the Streptomyces bacteriophage Amabiko.

Mark MilhavenHeba A BakryAnuvi BatraAmanda M BerminghamGloria GramaJacob KebeShawn S MartinezRishika V MudunuriMegan R NelsonEvie T NguyenMia M PetersonAlexis PruittKristan TranAkarshi BrarGabriella CernaElaine ChaffeeSteven M Caruso Susanne P Pfeifer

Published in: Microbiology resource announcements (2024)

Amabiko is a lytic subcluster BE2 bacteriophage that infects Streptomyces scabiei -a bacterium causing common scab in potatoes. Its 131,414 bp genome has a GC content of 49.5% and contains 245 putative protein-coding genes, 45 tRNAs, and one tmRNA. Amabiko is closely related to Streptomyces bacteriophage MindFlayer (gene content similarity: 86.5%).

Keyphrases

genome wide
genome wide identification
copy number
amino acid
protein protein
small molecule
bioinformatics analysis
gas chromatography
tandem mass spectrometry