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Combined genome and transcriptome sequencing to investigate the plant cell wall degrading enzyme system in the thermophilic fungus Malbranchea cinnamomea.

Silvia HüttnerThanh Thuy NguyenZoraide GranchiThomas Chin-A-WoengDag AhrénJohan LarsbrinkVu Nguyen ThanhLisbeth Olsson
Published in: Biotechnology for biofuels (2017)
The comprehensive combined genome and transcriptome analysis of M. cinnamomea provides a detailed insight into its response to growth on different types of biomass. In addition, the study facilitates the further exploration and exploitation of the repertoire of industrially relevant lignocellulolytic enzymes of this fungus.
Keyphrases
  • cell wall
  • genome wide
  • single cell
  • rna seq
  • gene expression
  • anaerobic digestion
  • dna methylation
  • wastewater treatment
  • high throughput sequencing