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Structural constraints of pyocin S2 import through the ferripyoverdine receptor FpvAI.

Jonathan D GoultDaniel C L VanYasmin V TaylorPatrick G InnsRenata KaminskaMartin VeselyColin KleanthousEmanuele Paci
Published in: PNAS nexus (2024)
TonB-dependent transporters (TBDTs) mediate energized transport of essential nutrients into gram-negative bacteria. TBDTs are increasingly being exploited for the delivery of antibiotics to drug-resistant bacteria. While much is known about ground state complexes of TBDTs, few details have emerged about the transport process itself. In this study, we exploit bacteriocin parasitization of a TBDT to probe the mechanics of transport. Previous work has shown that the N-terminal domain of Pseudomonas aeruginosa -specific bacteriocin pyocin S2 (PyoS2 NTD ) is imported through the pyoverdine receptor FpvAI. PyoS2 NTD transport follows the opening of a proton-motive force-dependent pore through FpvAI and the delivery of its own TonB box that engages TonB. We use molecular models and simulations to formulate a complete translocation pathway for PyoS2 NTD that we validate using protein engineering and cytotoxicity measurements. We show that following partial removal of the FpvAI plug domain which occludes the channel, the pyocin's N-terminus enters the channel by electrostatic steering and ratchets to the periplasm. Application of force, mimicking that exerted by TonB, leads to unraveling of PyoS2 NTD as it squeezes through the channel. Remarkably, while some parts of PyoS2 NTD must unfold, complete unfolding is not required for transport, a result we confirmed by disulfide bond engineering. Moreover, the section of the FpvAI plug that remains embedded in the channel appears to serve as a buttress against which PyoS2 NTD is pushed to destabilize the domain. Our study reveals the limits of structural deformation that accompanies import through a TBDT and the role the TBDT itself plays in accommodating transport.
Keyphrases
  • drug resistant
  • pseudomonas aeruginosa
  • acinetobacter baumannii
  • multidrug resistant
  • single molecule
  • binding protein
  • cystic fibrosis
  • small molecule
  • escherichia coli
  • molecular dynamics
  • risk assessment