Ultra-accurate microbial amplicon sequencing with synthetic long reads.
Benjamin J CallahanDmitry GrinevichSiddhartha ThakurMichael A BalamotisTuval Ben YehezkelPublished in: Microbiome (2021)
The order-of-magnitude improvement in length and accuracy over standard Illumina amplicon sequencing achieved with LoopSeq enables accurate species-level and strain identification from complex- to low-biomass microbiome samples. The ability to generate accurate and long microbiome sequencing reads using standard short read sequencers will accelerate the building of quality microbial sequence databases and removes a significant hurdle on the path to precision microbial genomics. Video abstract.