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Vitamin B 12 variants structure soil microbial communities despite soil's vast reservoir of B 12 .

Zachary F HallbergAlexa M NicolasZoila I Alvarez-AponteKenny C MokElla T SieradzkiJennifer Pett-RidgeJillian F BanfieldHans K CarlsonMary K FirestoneMichiko E Taga
Published in: bioRxiv : the preprint server for biology (2024)
Soil microbial communities perform critical ecosystem services through the collective metabolic activities of numerous individual organisms. Most microbes use corrinoids, a structurally diverse family of cofactors related to vitamin B 12 . Corrinoid structure influences the growth of individual microbes, yet how these growth responses scale to the community level remains unknown. Analysis of metagenome-assembled genomes suggests corrinoids are supplied to the community by members of the archaeal and bacterial phyla Thermoproteota, Actinobacteria, and Proteobacteria. Corrinoids were found largely adhered to the soil matrix in a grassland soil, at levels exceeding those required by cultured bacteria. Enrichment cultures and soil microcosms seeded with different corrinoids show distinct shifts in bacterial 16S composition, supporting the hypothesis that corrinoid structure can shape communities. Environmental context influenced both community and taxon-specific responses to specific corrinoids. These results implicate corrinoids as key determinants of soil microbiome structure and suggest that environmental micronutrient reservoirs promote community stability.
Keyphrases
  • healthcare
  • mental health
  • plant growth
  • primary care
  • human health
  • climate change
  • endothelial cells
  • risk assessment
  • dna methylation
  • copy number
  • genome wide
  • life cycle