anamiR: integrated analysis of MicroRNA and gene expression profiling.

Ti-Tai WangChien-Yueh LeeLiang-Chuan LaiMong-Hsun TsaiTzu-Pin LuEric Y Chuang

Published in: BMC bioinformatics (2019)

The anamiR package is effective for an integrated analysis of both RNA and microRNA profiles. By characterizing biological functions and signaling pathways, this package helps identify dysregulated genes/miRNAs from biological and medical experiments. The source code and manual of the anamiR package are freely available at https://bioconductor.org/packages/release/bioc/html/anamiR.html .

Keyphrases

genome wide
genome wide identification
signaling pathway
healthcare
dna methylation
transcription factor
copy number
gene expression
pi k akt
oxidative stress
bioinformatics analysis
induced apoptosis