Validation of a Whole Heart Segmentation from Computed Tomography Imaging Using a Deep-Learning Approach.
Sam SharobeemHervé Le BretonFlorent LalysMathieu LederlinClément LagorceMarc BedossaDominique BoulmierGuillaume LeurentPascal HaigronVincent AuffretPublished in: Journal of cardiovascular translational research (2021)
The aim of this study is to develop an automated deep-learning-based whole heart segmentation of ECG-gated computed tomography data. After 21 exclusions, CT acquired before transcatheter aortic valve implantation in 71 patients were reviewed and randomly split in a training (n = 55 patients), validation (n = 8 patients), and a test set (n = 8 patients). A fully automatic deep-learning method combining two convolutional neural networks performed segmentation of 10 cardiovascular structures, which was compared with the manually segmented reference by the Dice index. Correlations and agreement between myocardial volumes and mass were assessed. The algorithm demonstrated high accuracy (Dice score = 0.920; interquartile range: 0.906-0.925) and a low computing time (13.4 s, range 11.9-14.9). Correlations and agreement of volumes and mass were satisfactory for most structures. Six of ten structures were well segmented. Deep-learning-based method allowed automated WHS from ECG-gated CT data with a high accuracy. Challenges remain to improve right-sided structures segmentation and achieve daily clinical application.
Keyphrases
- deep learning
- convolutional neural network
- computed tomography
- end stage renal disease
- ejection fraction
- chronic kidney disease
- newly diagnosed
- artificial intelligence
- transcatheter aortic valve implantation
- magnetic resonance imaging
- prognostic factors
- aortic stenosis
- patient reported outcomes
- contrast enhanced
- aortic valve replacement
- electronic health record
- blood pressure
- aortic valve
- dual energy
- mass spectrometry
- single cell