Asthma and Post-Asthmatic Fibrosis: A Search for New Promising Molecular Markers of Transition from Acute Inflammation to Pulmonary Fibrosis.
Innokenty A SavinArseny D MoralevMarina A ZenkovaAleksandra V Sen'kovaPublished in: Biomedicines (2022)
Asthma is a heterogeneous pulmonary disorder, the progression and chronization of which leads to airway remodeling and fibrogenesis. To understand the molecular mechanisms of pulmonary fibrosis development, key genes forming the asthma-specific regulome and involved in lung fibrosis formation were revealed using a comprehensive bioinformatics analysis. The bioinformatics data were validated using a murine model of ovalbumin (OVA)-induced asthma and post-asthmatic fibrosis. The performed analysis revealed a range of well-known pro-fibrotic markers ( Cat , Ccl2 , Ccl4 , Ccr2 , Col1a1 , Cxcl12 , Igf1 , Muc5ac/Muc5b , Spp1 , Timp1 ) and a set of novel genes ( C3 , C3ar1 , Col4a1 , Col4a2 , Cyp2e1 , Fn1 , Thbs1 , Tyrobp ) mediating fibrotic changes in lungs already at the stage of acute/subacute asthma-driven inflammation. The validation of genes related to non-allergic bleomycin-induced pulmonary fibrosis on asthmatic/fibrotic lungs allowed us to identify new universal genes ( Col4a1 and Col4a2 ) associated with the development of lung fibrosis regardless of its etiology. The similarities revealed in the expression profiles of nodal fibrotic genes between asthma-driven fibrosis in mice and nascent idiopathic pulmonary fibrosis in humans suggest a tight association of identified genes with the early stages of airway remodeling and can be considered as promising predictors and early markers of pulmonary fibrosis.
Keyphrases
- pulmonary fibrosis
- bioinformatics analysis
- lung function
- idiopathic pulmonary fibrosis
- chronic obstructive pulmonary disease
- allergic rhinitis
- genome wide
- drug induced
- systemic sclerosis
- genome wide identification
- liver fibrosis
- liver injury
- cystic fibrosis
- air pollution
- oxidative stress
- genome wide analysis
- pulmonary hypertension
- single cell
- radiation therapy
- type diabetes
- dna methylation
- respiratory failure
- lymph node
- immune response
- blood brain barrier
- regulatory t cells
- machine learning
- acute respiratory distress syndrome
- transcription factor
- electronic health record
- insulin resistance
- extracorporeal membrane oxygenation