Automated Glycan Assembly of 19 F-labeled Glycan Probes Enables High-Throughput NMR Studies of Protein-Glycan Interactions.
Giulio FittolaniElena ShaninMónica GubermanPeter H SeebergerChristoph RademacherMartina DelbiancoPublished in: Angewandte Chemie (International ed. in English) (2021)
Protein-glycan interactions mediate important biological processes, including pathogen host invasion and cellular communication. Herein, we showcase an expedite approach that integrates automated glycan assembly (AGA) of 19 F-labeled probes and high-throughput NMR methods, enabling the study of protein-glycan interactions. Synthetic Lewis type 2 antigens were screened against seven glycan binding proteins (GBPs), including DC-SIGN and BambL, respectively involved in HIV-1 and lung infections in immunocompromised patients, confirming the preference for fucosylated glycans (Lex , H type 2, Ley ). Previously unknown glycan-lectin weak interactions were detected, and thermodynamic data were obtained. Enzymatic reactions were monitored in real-time, delivering kinetic parameters. These results demonstrate the utility of AGA combined with 19 F NMR for the discovery and characterization of glycan-protein interactions, opening up new perspectives for 19 F-labeled complex glycans.
Keyphrases
- cell surface
- high throughput
- magnetic resonance
- small molecule
- protein protein
- high resolution
- end stage renal disease
- deep learning
- ejection fraction
- chronic kidney disease
- machine learning
- amino acid
- dendritic cells
- solid state
- newly diagnosed
- nitric oxide
- mass spectrometry
- hiv aids
- binding protein
- living cells
- immune response
- prognostic factors
- patient reported outcomes
- electronic health record
- hiv testing