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Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates.

Bo GaoYali WangMohamed DiabyWencheng ZongDan ShenSaisai WangCai ChenXiaoyan WangChengyi Song
Published in: Mobile DNA (2020)
This is the first report to systematically reveal the evolutionary profiles of the pogo transposons, suggesting that pogo and Tc1/Mariner are two separate superfamilies of ITm group, and demonstrating the repeated domestications of pogo in vertebrates. These data indicate that pogo transposons have played important roles in shaping the genome and gene evolution of fungi and animals. This study expands our understanding of the diversity of pogo transposons and updates the classification of ITm group.
Keyphrases
  • genome wide
  • dna methylation
  • machine learning
  • deep learning
  • genome wide identification
  • copy number
  • electronic health record
  • big data
  • gene expression
  • single cell
  • transcription factor