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A V-Nitrogenase Variant Containing a Citrate-Substituted Cofactor.

Megan P NewcombChi Chung LeeKazuki TanifujiAndrew J JasniewskiJasper LiedtkeMarkus W RibbeYilin Hu
Published in: Chembiochem : a European journal of chemical biology (2019)
Nitrogenases catalyze the ambient reduction of N2 and CO at its cofactor site. Herein we present a biochemical and spectroscopic characterization of an Azotobacter vinelandii V nitrogenase variant expressing a citrate-substituted cofactor. Designated VnfDGKCit , the catalytic component of this V nitrogenase variant has an αβ2 (δ) subunit composition and carries an 8Fe P* cluster and a citrate-substituted V cluster analogue in the αβ dimer, as well as a 4Fe cluster in the "orphaned" β-subunit. Interestingly, when normalized based on the amount of cofactor, VnfDGKCit shows a shift of N2 reduction from H2 evolution toward NH3 formation and an opposite shift of CO reduction from hydrocarbon formation toward H2 evolution. These observations point to a role of the organic ligand in proton delivery during catalysis and imply the use of different reaction sites/mechanisms by nitrogenase for different substrate reductions. Moreover, the increased NH3 /H2 ratio upon citrate substitution suggests the possibility to modify the organic ligand for improved ammonia synthesis in the future.
Keyphrases
  • molecular docking
  • room temperature
  • air pollution
  • molecular dynamics simulations
  • particulate matter
  • water soluble
  • visible light
  • protein kinase
  • ionic liquid