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From Peptides to Peptidomimetics: A Strategy Based on the Structural Features of Cyclopropane.

Akira MizunoKouhei MatsuiSatoshi Shuto
Published in: Chemistry (Weinheim an der Bergstrasse, Germany) (2017)
Peptidomimetics, non-natural mimicries of bioactive peptides, comprise an important class of drug molecules. The essence of the peptidomimetic design is to mimic the key conformation assumed by the bioactive peptides upon binding to their targets. Regulation of the conformation of peptidomimetics is important not only to enhance target binding affinity and selectivity, but also to confer cell-membrane permeability for targeting protein-protein interactions in cells. The rational design of peptidomimetics with suitable three-dimensional structures is challenging, however, due to the inherent flexibility of peptides and their dynamic conformational changes upon binding to the target biomolecules. In this Minireview, a three-dimensional structural diversity-oriented strategy based on the characteristic structural features of cyclopropane to address this challenging issue in peptidomimetic chemistry is described.
Keyphrases
  • molecular dynamics simulations
  • amino acid
  • induced apoptosis
  • molecular dynamics
  • high resolution
  • cancer therapy
  • oxidative stress
  • mass spectrometry
  • signaling pathway
  • adverse drug
  • drug discovery
  • drug induced