Illumina short read-based shotgun metagenomic data sets of simulated bacterial communities derived from fresh spinach and surface water.
Zhao ChenJianghong MengPublished in: Microbiology resource announcements (2024)
Paired-end short reads of Illumina HiSeq, MiSeq, and NovaSeq of simulated bacterial communities from fresh spinach and surface water were generated in silico at various sequencing depths. Multidrug-resistant Salmonella enterica serotype Indiana was included in the spinach community, while the water community contained multidrug-resistant Pseudomonas aeruginosa .
Keyphrases
- multidrug resistant
- acinetobacter baumannii
- klebsiella pneumoniae
- pseudomonas aeruginosa
- drug resistant
- gram negative
- mental health
- healthcare
- molecular docking
- high throughput sequencing
- electronic health record
- biofilm formation
- dengue virus
- big data
- single cell
- escherichia coli
- deep learning
- artificial intelligence
- wastewater treatment