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Single nucleotide polymorphism genes and mitochondrial DNA haplogroups as biomarkers for early prediction of knee osteoarthritis structural progressors: use of supervised machine learning classifiers.

Hossein BonakdariJean-Pierre PelletierFrancisco J BlancoIgnacio Rego-PérezAlejandro Durán-SotuelaDawn AitkenGraeme JonesFlavia CicuttiniAfshin JamshidiFrançois AbramJohanne Martel-Pelletier
Published in: BMC medicine (2022)
This study introduces a novel source of decision support in precision medicine in which, for the first time, two models were developed consisting of (i) age, BMI, TP63, DUS4L, GDF5, and FTO and (ii) the optimum one as it has one less variable: age, BMI, mtDNA haplogroup, FTO, and SUPT3H. Such a framework is translational and would benefit patients at risk of structural progressive knee osteoarthritis.
Keyphrases
  • knee osteoarthritis
  • mitochondrial dna
  • machine learning
  • copy number
  • body mass index
  • multiple sclerosis
  • weight gain
  • artificial intelligence
  • big data
  • dna methylation
  • transcription factor
  • genome wide identification