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Transcriptional regulation of living materials via extracellular electron transfer.

Austin J GrahamGina PartipiloChristopher M DundasIsmar E Miniel MahfoudKathleen N HalwachsAlexis J HolwerdaTrevor R SimmonsThomas M FitzSimonsSarah M ColemanRebecca RinehartDarian ChiuAvery E TyndallKenneth C SajbelAdrianne M RosalesBenjamin K Keitz
Published in: Nature chemical biology (2024)
Engineered living materials combine the advantages of biological and synthetic systems by leveraging genetic and metabolic programming to control material-wide properties. Here, we demonstrate that extracellular electron transfer (EET), a microbial respiration process, can serve as a tunable bridge between live cell metabolism and synthetic material properties. In this system, EET flux from Shewanella oneidensis to a copper catalyst controls hydrogel cross-linking via two distinct chemistries to form living synthetic polymer networks. We first demonstrate that synthetic biology-inspired design rules derived from fluorescence parameterization can be applied toward EET-based regulation of polymer network mechanics. We then program transcriptional Boolean logic gates to govern EET gene expression, which enables design of computational polymer networks that mechanically respond to combinations of molecular inputs. Finally, we control fibroblast morphology using EET as a bridge for programmed material properties. Our results demonstrate how rational genetic circuit design can emulate physiological behavior in engineered living materials.
Keyphrases
  • electron transfer
  • gene expression
  • genome wide
  • dna methylation
  • microbial community
  • single molecule
  • ionic liquid
  • heat stress