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Functional characterisation of a novel class of in-frame insertion variants of KRAS and HRAS.

Astrid EijkelenboomFrederik M A van SchaikRobert M van EsRoel W Ten BroekTuula RinneCarine van der VleutenUta FluckeMarjolijn J L LigtenbergHolger Rehmann
Published in: Scientific reports (2019)
Mutations in the RAS genes are identified in a variety of clinical settings, ranging from somatic mutations in oncology to germline mutations in developmental disorders, also known as 'RASopathies', and vascular malformations/overgrowth syndromes. Generally single amino acid substitutions are identified, that result in an increase of the GTP bound fraction of the RAS proteins causing constitutive signalling. Here, a series of 7 in-frame insertions and duplications in HRAS (n = 5) and KRAS (n = 2) is presented, resulting in the insertion of 7-10 amino acids residues in the switch II region. These variants were identified in routine diagnostic screening of 299 samples for somatic mutations in vascular malformations/overgrowth syndromes (n = 6) and in germline analyses for RASopathies (n = 1). Biophysical characterization shows the inability of Guanine Nucleotide Exchange Factors to induce GTP loading and reduced intrinsic and GAP-stimulated GTP hydrolysis. As a consequence of these opposing effects, increased RAS signalling is detected in a cellular model system. Therefore these in-frame insertions represent a new class of weakly activating clinically relevant RAS variants.
Keyphrases
  • wild type
  • copy number
  • amino acid
  • genome wide
  • dna repair
  • palliative care
  • signaling pathway
  • clinical practice
  • gene expression
  • dna damage
  • oxidative stress
  • anaerobic digestion
  • bioinformatics analysis