Implementation of multigene panel NGS diagnosis in the national primary ciliary dyskinesia cohort of Cyprus: An island with a high disease prevalence.
Panayiotis K YiallourosPanayiotis KouisKyriacos KyriacouAigli EvriviadouPinelopi AnagnostopoulouAndreas M MatthaiouIoannis TsiolakisPanayiota PirpaKyriaki MichailidouLouiza PotamitiMaria A LoizidouAndreas HadjisavvasPublished in: Human mutation (2021)
We aimed to determine a genetic diagnosis in the national primary ciliary dyskinesia (PCD) cohort of Cyprus, an island with a high disease prevalence. We used targeted next-generation sequencing (NGS) of 39 PCD genes in 48 patients of Greek-Cypriot and other ancestries. We achieved a molecular diagnosis in 74% of the unrelated families tested. We identified 24 different mutations in 11 genes, 12 of which are novel. Homozygosity was more common in Greek-Cypriot than non-Greek-Cypriot patients (88% vs. 46.2%, p = .016). Four mutations (DNAH11:c.5095-2A>G, CFAP300:c.95_103delGCCGGCTCC, TTC25:c.716G>A, RSPH9:c.670+2T>C) were found in 74% of the diagnosed Greek-Cypriot families. Patients with RSPH9 mutations demonstrated higher nasal nitric oxide (57 vs. 15 nl/min, p <.001), higher forced expiratory volume in 1 s (-0.89 vs. -2.37, p = .018) and forced vital capacity (-1.00 vs. -2.16, p = .029) z scores than the rest of the cohort. Targeted multigene-panel NGS is an efficient tool for early diagnosis of PCD, providing insight into genetic disease epidemiology and improved patient stratification.
Keyphrases
- end stage renal disease
- nitric oxide
- genome wide
- ejection fraction
- chronic kidney disease
- newly diagnosed
- quality improvement
- healthcare
- copy number
- primary care
- cancer therapy
- patient reported outcomes
- dna methylation
- acute respiratory distress syndrome
- drug delivery
- patient reported
- cord blood
- genome wide identification