Interpreting the Molecular Mechanisms of Yinchenhao Decoction on Hepatocellular Carcinoma through Absorbed Components Based on Network Pharmacology.
Jijia SunTao HanTao YangYun-Hui ChenJihan HuangPublished in: BioMed research international (2021)
To investigate the mechanisms through which Yinchenhao decoction (YCHD) inhibits hepatocellular carcinoma (HCC), we analyzed YCHD ingredients absorbed into the bloodstream by using network pharmacology. We conducted a weighted gene coexpression network analysis on gene expression data collected from the Gene Expression Omnibus and The Cancer Genome Atlas databases to derive an HCC gene set; moreover, we used four online prediction system databases to predict the potential targets of YCHD ingredients absorbed into the bloodstream. We discovered that YCHD directly interfered with 17 HCC-related disease targets. Subsequent gene ontology enrichment analyses of these 17 disease targets revealed that YCHD exhibited effects through 17 biological processes, 7 molecular functions, and 9 cellular components. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses indicated 14 pathways through which YCHD inhibits HCC. We observed similar trends in how the 17 small molecules interfered with the key target set. We surmised that YCHD inhibits HCC by regulating inflammatory and metabolic pathways. Network pharmacological analysis of YCHD ingredients absorbed into the bloodstream may provide new insights and serve as a new method for discovering the molecular mechanisms through which YCHD inhibits HCC.
Keyphrases
- network analysis
- gene expression
- genome wide
- dna methylation
- genome wide identification
- copy number
- gram negative
- big data
- klebsiella pneumoniae
- single cell
- oxidative stress
- healthcare
- machine learning
- magnetic resonance imaging
- escherichia coli
- squamous cell carcinoma
- multidrug resistant
- genome wide analysis
- transcription factor
- papillary thyroid
- health information
- climate change
- young adults
- risk assessment
- lymph node metastasis
- squamous cell