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Segmentor: a tool for manual refinement of 3D microscopy annotations.

David BorlandCarolyn M McCormickNiyanta K PatelOleh KrupaJessica T MoryAlvaro A BeltranTala M FarahCarla F Escobar-TomlienovichSydney S OlsonMinjeong KimGuorong WuJason L Stein
Published in: BMC bioinformatics (2021)
Segmentor is a tool for increased efficiency of manual annotation and refinement of 3D objects that can be used to train deep learning segmentation algorithms, and is available at https://www.nucleininja.org/ and https://github.com/RENCI/Segmentor .
Keyphrases
  • deep learning
  • convolutional neural network
  • machine learning
  • artificial intelligence
  • high speed
  • high resolution
  • single molecule
  • high throughput
  • optical coherence tomography
  • rna seq
  • label free