Central neurocytoma exhibits radial glial cell signatures with FGFR3 hypomethylation and overexpression.
Yeajina LeeTamrin ChowdhurySojin KimHyeon Jong YuKyung-Min KimHo KangMin-Sung KimJin Wook KimYong-Hwy KimSo Young JiKihwan HwangJung Ho HanJinha HwangSeong-Keun YooKyu Sang LeeGheeyoung ChoeJae-Kyung WonHye-Kyung ParkYong Kyu LeeJoo-Heon ShinChul-Kee ParkChae-Yong KimJong-Il KimPublished in: Experimental & molecular medicine (2024)
We explored the genomic events underlying central neurocytoma (CN), a rare neoplasm of the central nervous system, via multiomics approaches, including whole-exome sequencing, bulk and single-nuclei RNA sequencing, and methylation sequencing. We identified FGFR3 hypomethylation leading to FGFR3 overexpression as a major event in the ontogeny of CN that affects crucial downstream events, such as aberrant PI3K-AKT activity and neuronal development pathways. Furthermore, we found similarities between CN and radial glial cells based on analyses of gene markers and CN tumor cells and postulate that CN tumorigenesis is due to dysregulation of radial glial cell differentiation into neurons. Our data demonstrate the potential role of FGFR3 as one of the leading drivers of tumorigenesis in CN.
Keyphrases
- lymph node metastasis
- pi k akt
- single cell
- cell proliferation
- cell cycle arrest
- signaling pathway
- genome wide
- neuropathic pain
- squamous cell carcinoma
- induced apoptosis
- copy number
- spinal cord
- transcription factor
- spinal cord injury
- gene expression
- electronic health record
- machine learning
- low grade
- deep learning
- brain injury
- blood brain barrier
- climate change
- human health
- mesenchymal stem cells
- oxidative stress
- cerebral ischemia
- data analysis