Translating Cancer Molecular Variability into Personalized Information Using Bulk and Single Cell Approaches.
Nataly Kravchenko-BalashaPublished in: Proteomics (2020)
Cancer research is striving toward new frontiers of assigning the correct personalized drug(s) to a given patient. However, extensive tumor heterogeneity poses a major obstacle. Tumors of the same type often respond differently to therapy, due to patient-specific molecular aberrations and/or untargeted tumor subpopulations. It is frequently not possible to determine a priori which patients will respond to a certain therapy or how an efficient patient-specific combined therapy should be designed. Large-scale datasets have been growing at an accelerated pace and various technologies and analytical tools for single cell and bulk level analyses are being developed to extract significant individualized signals from such heterogeneous data. However, personalized therapies that dramatically alter the course of the disease remain scarce, and most tumors still respond poorly to medical care. In this review, the basic concepts of bulk and single cell approaches are discussed, as well as their emerging role in individualized designs of drug therapies, including the advantages and limitations of their applications in personalized medicine.
Keyphrases
- single cell
- rna seq
- papillary thyroid
- high throughput
- end stage renal disease
- squamous cell
- newly diagnosed
- ejection fraction
- gene expression
- chronic kidney disease
- emergency department
- copy number
- stem cells
- peritoneal dialysis
- cell therapy
- adverse drug
- high resolution
- dna methylation
- liquid chromatography
- social media
- artificial intelligence
- mesenchymal stem cells
- health information
- data analysis