Mapping SP-C co-chaperone binding sites reveals molecular consequences of disease-causing mutations on protein maturation.
Kristine F R Pobre-PizaMelissa J MannAshley R FloryLinda M HendershotPublished in: Nature communications (2022)
BiP co-chaperones ERdj4, ERdj5, and GRP170 associate in cells with peptides predicted to be aggregation prone. Here, extending these findings to a full-length protein, we examine two Interstitial Lung Disease-associated mutants (ILD) of surfactant protein C (SP-C). The TANGO algorithm, which identifies sequences prone to formation of β strand aggregates, found three such regions in SP-C: the N-terminal transmembrane (TM) domain and two sites in the intermolecular chaperone BRICHOS domain. We show the ILD mutants disrupt di-sulfide bond formation in the BRICHOS domain and expose the aggregation-prone peptides leading to binding of ERdj4, ERdj5, and GRP170. The destabilized mutant BRICHOS domain fails to properly insert its TM region in the ER membrane, exposing part of the N-terminal TM domain site. Our studies with ILD-associated mutant proteins provide insights into the specificity of ERdj4, ERdj5, and GRP170, identify context-dependent differences in their binding, and reveal molecular consequences of disease-associated mutants on folding.
Keyphrases
- dna binding
- interstitial lung disease
- systemic sclerosis
- rheumatoid arthritis
- idiopathic pulmonary fibrosis
- amino acid
- endoplasmic reticulum stress
- wild type
- induced apoptosis
- single molecule
- genome wide
- binding protein
- heat shock
- protein protein
- machine learning
- cell surface
- cystic fibrosis
- deep learning
- single cell
- estrogen receptor
- pseudomonas aeruginosa