RNAlign2D: a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix.
Tomasz WoźniakMałgorzata SajekJadwiga JaruzelskaMarcin Piotr SajekPublished in: BMC bioinformatics (2021)
RNAlign2D produces accurate RNA alignments in a very short time. The pseudo-amino acid substitution matrix approach utilized in RNAlign2D is applicable for virtually all protein aligners.