Characterization and Mitigation of a Simultaneous Multi-Slice fMRI Artifact: Multiband Artifact Regression in Simultaneous Slices.
Philip N TubioloJohn C WilliamsJared X Van SnellenbergPublished in: bioRxiv : the preprint server for biology (2023)
Simultaneous multi-slice (multiband) acceleration in fMRI has become widespread, but may be affected by novel forms of signal artifact. Here, we demonstrate a previously unreported artifact manifesting as a shared signal between simultaneously acquired slices in all resting-state and task-based multiband fMRI datasets we investigated, including publicly available consortium data. We propose Multiband Artifact Regression in Simultaneous Slices (MARSS), a regression-based detection and correction technique that successfully mitigates this shared signal in unprocessed data. We demonstrate that the signal isolated by MARSS correction is likely non-neural, appearing stronger in neurovasculature than grey matter. We show that MARSS correction leads to study-wide increases in signal-to-noise ratio, decreases in cortical coefficient of variation, and mitigation of systematic artefactual spatial patterns in participant-level task betas. Finally, we demonstrate that MARSS correction has substantive effects on second-level t-statistics in analyses of task-evoked activation. We recommend that investigators apply MARSS to all multiband fMRI datasets.
Keyphrases
- resting state
- functional connectivity
- image quality
- dual energy
- climate change
- electronic health record
- computed tomography
- big data
- machine learning
- multiple sclerosis
- radiation therapy
- rna seq
- white matter
- single cell
- artificial intelligence
- data analysis
- magnetic resonance imaging
- atomic force microscopy
- real time pcr
- single molecule