H3AGWAS: a portable workflow for genome wide association studies.

Jean-Tristan BrandenburgLindsay ClarkGerrit BothaSumir PanjiShakuntala BaichooChristopher FieldsScott Hazelhurst

Published in: BMC bioinformatics (2022)

The workflow is scalable-laptop to cluster to cloud (e.g., SLURM, AWS Batch, Azure). All required software is containerised and can run under Docker or Singularity.

Keyphrases

genome wide association
electronic health record
case control
data analysis
anaerobic digestion