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Free volume theory explains the unusual behavior of viscosity in a non-confluent tissue during morphogenesis.

Rajsekhar DasSumit SinhaXin LiT R KirkpatrickD Thirumalai
Published in: eLife (2024)
A recent experiment on zebrafish blastoderm morphogenesis showed that the viscosity ( η ) of a non-confluent embryonic tissue grows sharply until a critical cell packing fraction ( ϕ S ). The increase in η up to ϕ S is similar to the behavior observed in several glass-forming materials, which suggests that the cell dynamics is sluggish or glass-like. Surprisingly, η is a constant above ϕ S . To determine the mechanism of this unusual dependence of η on ϕ , we performed extensive simulations using an agent-based model of a dense non-confluent two-dimensional tissue. We show that polydispersity in the cell size, and the propensity of the cells to deform, results in the saturation of the available free area per cell beyond a critical packing fraction. Saturation in the free space not only explains the viscosity plateau above ϕ S but also provides a relationship between equilibrium geometrical packing to the dramatic increase in the relaxation dynamics.
Keyphrases
  • single cell
  • cell therapy
  • stem cells
  • induced apoptosis
  • molecular dynamics simulations
  • bone marrow
  • endoplasmic reticulum stress
  • cell cycle arrest
  • pi k akt