Sensing of Proteins by ICD Response of Iron(II) Clathrochelates Functionalized by Carboxyalkylsulfide Groups.
Mykhaylo Yu LosytskyyNina ChornenkaSerhii VakarovSamuel M Meier-MenchesChristopher GernerSlawomir PotockiVladimir B ArionElzbieta Gumienna-KonteckaYan VoloshinVladyslava KovalskaPublished in: Biomolecules (2020)
Recognition of elements of protein tertiary structure is crucial for biotechnological and biomedical tasks; this makes the development of optical sensors for certain protein surface elements important. Herein, we demonstrated the ability of iron(II) clathrochelates (1-3) functionalized with mono-, di- and hexa-carboxyalkylsulfide to induce selective circular dichroism (CD) response upon binding to globular proteins. Thus, inherently CD-silent clathrochelates revealed selective inducing of CD spectra when binding to human serum albumin (HSA) (1, 2), beta-lactoglobuline (2) and bovine serum albumin (BSA) (3). Hence, functionalization of iron(II) clathrochelates with the carboxyalkylsulfide group appears to be a promising tool for the design of CD-probes sensitive to certain surface elements of proteins tertiary structure. Additionally, interaction of 1-3 with proteins was also studied by isothermal titration calorimetry, protein fluorescence quenching, electrospray ionization mass spectrometry (ESI-MS) and computer simulations. Formation of both 1:1 and 1:2 assemblies of HSA with 1-3 was evidenced by ESI-MS. A protein fluorescence quenching study suggests that 3 binds with both BSA and HSA via the sites close to Trp residues. Molecular docking calculations indicate that for both BSA and HSA, binding of 3 to Site I and to an "additional site" is more favorable energetically than binding to Site II.
Keyphrases
- mass spectrometry
- ms ms
- molecular docking
- protein protein
- amino acid
- multiple sclerosis
- binding protein
- energy transfer
- small molecule
- nk cells
- human serum albumin
- single molecule
- quantum dots
- molecular dynamics
- density functional theory
- machine learning
- cystic fibrosis
- staphylococcus aureus
- single cell
- high performance liquid chromatography
- molecularly imprinted
- simultaneous determination
- tandem mass spectrometry