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High-level ab initio mapping of the multiple H-abstraction pathways of the OH + glycine reaction.

Balázs GruberGábor Czakó
Published in: Physical chemistry chemical physics : PCCP (2023)
We perform a systematic search in the transition-state (TS) and product-channel complex (MIN) regions of the multi-channel OH + glycine → H 2 O + H 2 N-CH-COOH (CH)/HN-CH 2 -COOH (NH)/H 2 N-CH 2 -COO (COOH) reactions. Geometry optimizations reveal {7, 3, 3} CH-TS, {2, 2, 2} CH-MIN, {17, 10, 5} NH-TS, {35, 19, 19} NH-MIN, and {6, 5, 5} COOH-TS conformers at the {MP2/3-21G, MP2/aug-cc-pVDZ, CCSD(T)-F12b/aug-cc-pVDZ} levels of theory as well as 2 additional CH-TSs based on chemical intuition. The benchmark relative energies of the TS, MIN, and product conformers are obtained by considering basis set effects up to aug-cc-pVQZ using the explicitly-correlated CCSD(T)-F12b method, post-(T) correlation up to CCSDT(Q), core correlation, scalar relativistic effects, spin-orbit coupling, and zero-point energy corrections. All the CH [Δ E e (Δ H 0 ) = -38.54(-38.61) kcal mol -1 ], NH [Δ E e (Δ H 0 ) = -16.72(-17.98) kcal mol -1 ], and COOH [Δ E e = -4.98 kcal mol -1 ] reactions are exothermic and proceed via shallow, usually negative, classical(adiabatic) barriers of -0.37(-0.95), -1.91(-2.48), and 1.02(-0.57) kcal mol -1 , respectively. In the entrance channel MRCI/aug-cc-pVTZ computations reveal several complexes with reactive(non-reactive) arrangements and binding energies of 1.0, 1.6, 3.3, (5.2 and 5.9) kcal mol -1 , stabilized by CH⋯OH, NH⋯OH, COOH⋯OH, (OH⋯OC and OH⋯N) hydrogen bonds, respectively.
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