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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound.

Sook-Young ParkJongbum JeonJung A KimMi Jin JeonNan Hee YuSeulbi KimAe Ran ParkJin-Cheol KimYerim LeeYoungmin KimEu Ddeum ChoiMin-Hye JeongYong-Hwan LeeSoonok Kim
Published in: Mycobiology (2021)
An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.
Keyphrases
  • genome wide
  • copy number
  • genome wide identification
  • dna methylation
  • transcription factor
  • ms ms
  • cell wall
  • genome wide analysis
  • mass spectrometry