XenoCell: classification of cellular barcodes in single cell experiments from xenograft samples.

Stefano CheloniRoman HilljeLucilla LuziPier Giuseppe PelicciElena Gatti

Published in: BMC medical genomics (2021)

XenoCell accurately dissects sequence reads from any host and graft combination of species as well as from a broad range of single-cell experiments and platforms. It is open source and available at https://gitlab.com/XenoCell/XenoCell .

Keyphrases

single cell
rna seq
high throughput
machine learning
deep learning