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Understanding the Stabilizing Effect of Histidine on mAb Aggregation: A Molecular Dynamics Study.

Suman SaurabhCavan KaloniaZongyi LiPeter HollowellThomas A WaighPeixun LiJohn WebsterJohn M SeddonJian Ren LuFernando Bresme
Published in: Molecular pharmaceutics (2022)
Histidine, a widely used buffer in monoclonal antibody (mAb) formulations, is known to reduce antibody aggregation. While experimental studies suggest a nonelectrostatic, nonstructural (relating to secondary structure preservation) origin of the phenomenon, the underlying microscopic mechanism behind the histidine action is still unknown. Understanding this mechanism will help evaluate and predict the stabilizing effect of this buffer under different experimental conditions and for different mAbs. We have used all-atom molecular dynamics simulations and contact-based free energy calculations to investigate molecular-level interactions between the histidine buffer and mAbs, which lead to the observed stability of therapeutic formulations in the presence of histidine. We reformulate the Spatial Aggregation Propensity index by including the buffer-protein interactions. The buffer adsorption on the protein surface leads to lower exposure of the hydrophobic regions to water. Our analysis indicates that the mechanism behind the stabilizing action of histidine is connected to the shielding of the solvent-exposed hydrophobic regions on the protein surface by the buffer molecules.
Keyphrases
  • molecular dynamics
  • monoclonal antibody
  • molecular dynamics simulations
  • density functional theory
  • ionic liquid
  • protein protein
  • amino acid
  • binding protein
  • aqueous solution
  • molecular docking
  • data analysis