Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen.

Hongxin ChenRobert KingDan SmithCarlos BayonTom AshfieldStefano TorrianiKostya KanyukaKim Hammond-KosackStephane BieriJason J Rudd

Published in: BMC biology (2023)

These data support the combined use of pangenomics and transcriptomics for defining genes which represent core, and potentially exploitable, weaknesses in rapidly evolving pathogens.

Keyphrases

single cell
antimicrobial resistance
escherichia coli
pseudomonas aeruginosa
staphylococcus aureus
electronic health record
biofilm formation
genome wide
gram negative
candida albicans
cell wall
gene expression
multidrug resistant
data analysis